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Cluster: HRGMv2_2932_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2932_5 HRGMv2_2932_5_115 126423 128183 + 2.A.58.2.2
STP HRGMv2_2932_5 HRGMv2_2932_5_116 128185 128649 + NUDIX
CAZyme HRGMv2_2932_5 HRGMv2_2932_5_117 128687 129817 + GH18
pfam HRGMv2_2932_5 HRGMv2_2932_5_118 130149 131537 - FAD-depend_C
TC HRGMv2_2932_5 HRGMv2_2932_5_119 131751 132329 + 4.F.1.1.7
pfam HRGMv2_2932_5 HRGMv2_2932_5_120 132326 132796 + CrtO
CAZyme HRGMv2_2932_5 HRGMv2_2932_5_121 132793 134844 + GT28
pfam HRGMv2_2932_5 HRGMv2_2932_5_122 135265 136116 + Hydrolase | S6PP | Hydrolase_3
TC HRGMv2_2932_5 HRGMv2_2932_5_123 136148 137590 - 2.A.1.84.1
Gene ID: HRGMv2_2932_5_115
Type: TC
Location: 126423 - 128183 (+)
Gene ID: HRGMv2_2932_5_116
Type: STP
Location: 128185 - 128649 (+)
Gene ID: HRGMv2_2932_5_117
Type: CAZyme
Location: 128687 - 129817 (+)
Gene ID: HRGMv2_2932_5_118
Type: pfam
Location: 130149 - 131537 (-)
Gene ID: HRGMv2_2932_5_119
Type: TC
Location: 131751 - 132329 (+)
Gene ID: HRGMv2_2932_5_120
Type: pfam
Location: 132326 - 132796 (+)
Gene ID: HRGMv2_2932_5_121
Type: CAZyme
Location: 132793 - 134844 (+)
Gene ID: HRGMv2_2932_5_122
Type: pfam
Location: 135265 - 136116 (+)
Gene ID: HRGMv2_2932_5_123
Type: TC
Location: 136148 - 137590 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2932_5_123 vegetarian > vegan 1.78184 0.00363

🧭 Explore Read Mapping of CGC

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