Cluster: HRGMv2_2932_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2932
- CGC Family ID: CGCFAM_01983
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2932_3 | HRGMv2_2932_3_142 | 150002 | 151084 | - | 3.A.1.2.12 |
| TC | HRGMv2_2932_3 | HRGMv2_2932_3_143 | 151081 | 152607 | - | 3.A.1.2.17 |
| pfam | HRGMv2_2932_3 | HRGMv2_2932_3_144 | 152762 | 153943 | - | Bmp |
| STP | HRGMv2_2932_3 | HRGMv2_2932_3_145 | 154274 | 154849 | - | Pribosyltran |
| TC | HRGMv2_2932_3 | HRGMv2_2932_3_146 | 155044 | 156516 | + | 2.A.2.2.3 |
| CAZyme | HRGMv2_2932_3 | HRGMv2_2932_3_147 | 156513 | 157268 | + | CE14 |
| CAZyme | HRGMv2_2932_3 | HRGMv2_2932_3_148 | 157311 | 159044 | - | CE4 |
Gene ID: HRGMv2_2932_3_142
Type: TC
Location: 150002 - 151084 (-)
Type: TC
Location: 150002 - 151084 (-)
Gene ID: HRGMv2_2932_3_143
Type: TC
Location: 151081 - 152607 (-)
Type: TC
Location: 151081 - 152607 (-)
Gene ID: HRGMv2_2932_3_144
Type: pfam
Location: 152762 - 153943 (-)
Type: pfam
Location: 152762 - 153943 (-)
Gene ID: HRGMv2_2932_3_145
Type: STP
Location: 154274 - 154849 (-)
Type: STP
Location: 154274 - 154849 (-)
Gene ID: HRGMv2_2932_3_146
Type: TC
Location: 155044 - 156516 (+)
Type: TC
Location: 155044 - 156516 (+)
Gene ID: HRGMv2_2932_3_147
Type: CAZyme
Location: 156513 - 157268 (+)
Type: CAZyme
Location: 156513 - 157268 (+)
Gene ID: HRGMv2_2932_3_148
Type: CAZyme
Location: 157311 - 159044 (-)
Type: CAZyme
Location: 157311 - 159044 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
F23-B02
Species
F23-B02 sp000431075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.