Cluster: HRGMv2_2932_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2932
- CGC Family ID: CGCFAM_02853
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2932_3 | HRGMv2_2932_3_29 | 30697 | 31029 | - | 2.A.78.1.1 |
| TC | HRGMv2_2932_3 | HRGMv2_2932_3_30 | 31026 | 31721 | - | 2.A.78.1.1 |
| pfam | HRGMv2_2932_3 | HRGMv2_2932_3_31 | 31775 | 32014 | - | SecG |
| CAZyme | HRGMv2_2932_3 | HRGMv2_2932_3_32 | 32126 | 33394 | - | GT76 |
| NULL(UNKNOWN) | HRGMv2_2932_3 | HRGMv2_2932_3_33 | 33557 | 34249 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2932_3 | HRGMv2_2932_3_34 | 34391 | 34762 | - | 1.A.43.1.13 |
Gene ID: HRGMv2_2932_3_29
Type: TC
Location: 30697 - 31029 (-)
Type: TC
Location: 30697 - 31029 (-)
Gene ID: HRGMv2_2932_3_30
Type: TC
Location: 31026 - 31721 (-)
Type: TC
Location: 31026 - 31721 (-)
Gene ID: HRGMv2_2932_3_31
Type: pfam
Location: 31775 - 32014 (-)
Type: pfam
Location: 31775 - 32014 (-)
Gene ID: HRGMv2_2932_3_32
Type: CAZyme
Location: 32126 - 33394 (-)
Type: CAZyme
Location: 32126 - 33394 (-)
Gene ID: HRGMv2_2932_3_33
Type:
Location: 33557 - 34249 (-)
Type:
Location: 33557 - 34249 (-)
Gene ID: HRGMv2_2932_3_34
Type: TC
Location: 34391 - 34762 (-)
Type: TC
Location: 34391 - 34762 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
F23-B02
Species
F23-B02 sp000431075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.