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Cluster: HRGMv2_2932_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2932_2 HRGMv2_2932_2_190 201857 203968 + GT51
NULL(UNKNOWN) HRGMv2_2932_2 HRGMv2_2932_2_191 203995 204276 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2932_2 HRGMv2_2932_2_192 204403 205785 + 3.B.1.1.6
pfam HRGMv2_2932_2 HRGMv2_2932_2_193 205798 206130 + OAD_gamma
TC HRGMv2_2932_2 HRGMv2_2932_2_194 206120 206506 + 3.B.1.1.2
TC HRGMv2_2932_2 HRGMv2_2932_2_195 206519 207742 + 3.B.1.1.2
STP HRGMv2_2932_2 HRGMv2_2932_2_196 207796 209337 - HD
CAZyme HRGMv2_2932_2 HRGMv2_2932_2_197 209615 211381 + GT39
Gene ID: HRGMv2_2932_2_190
Type: CAZyme
Location: 201857 - 203968 (+)
Gene ID: HRGMv2_2932_2_191
Type:
Location: 203995 - 204276 (+)
Gene ID: HRGMv2_2932_2_192
Type: TC
Location: 204403 - 205785 (+)
Gene ID: HRGMv2_2932_2_193
Type: pfam
Location: 205798 - 206130 (+)
Gene ID: HRGMv2_2932_2_194
Type: TC
Location: 206120 - 206506 (+)
Gene ID: HRGMv2_2932_2_195
Type: TC
Location: 206519 - 207742 (+)
Gene ID: HRGMv2_2932_2_196
Type: STP
Location: 207796 - 209337 (-)
Gene ID: HRGMv2_2932_2_197
Type: CAZyme
Location: 209615 - 211381 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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