Cluster: HRGMv2_2932_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2932
- CGC Family ID: CGCFAM_03603
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2932_2 | HRGMv2_2932_2_45 | 48467 | 50800 | - | GH36 |
| TC | HRGMv2_2932_2 | HRGMv2_2932_2_46 | 51100 | 52704 | + | 3.A.1.121.4 |
| TC | HRGMv2_2932_2 | HRGMv2_2932_2_47 | 52756 | 53673 | - | 2.A.69.4.3 |
| TC | HRGMv2_2932_2 | HRGMv2_2932_2_48 | 53670 | 55070 | - | 1.A.26.1.2 |
| pfam | HRGMv2_2932_2 | HRGMv2_2932_2_49 | 55107 | 56342 | - | AdoHcyase_NAD | 2-Hacid_dh_C | AdoHcyase | AdoHcyase | KARI_N |
| TC | HRGMv2_2932_2 | HRGMv2_2932_2_50 | 56468 | 57871 | - | 2.A.25.1.3 |
Gene ID: HRGMv2_2932_2_45
Type: CAZyme
Location: 48467 - 50800 (-)
Type: CAZyme
Location: 48467 - 50800 (-)
Gene ID: HRGMv2_2932_2_46
Type: TC
Location: 51100 - 52704 (+)
Type: TC
Location: 51100 - 52704 (+)
Gene ID: HRGMv2_2932_2_47
Type: TC
Location: 52756 - 53673 (-)
Type: TC
Location: 52756 - 53673 (-)
Gene ID: HRGMv2_2932_2_48
Type: TC
Location: 53670 - 55070 (-)
Type: TC
Location: 53670 - 55070 (-)
Gene ID: HRGMv2_2932_2_49
Type: pfam
Location: 55107 - 56342 (-)
Type: pfam
Location: 55107 - 56342 (-)
Gene ID: HRGMv2_2932_2_50
Type: TC
Location: 56468 - 57871 (-)
Type: TC
Location: 56468 - 57871 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
F23-B02
Species
F23-B02 sp000431075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2932_2_48 | vegetarian > omnivore | 1.15141 | 0.00450 |