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Cluster: HRGMv2_2932_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2932_1 HRGMv2_2932_1_198 204658 205368 - 9.B.120.1.2
NULL(UNKNOWN) HRGMv2_2932_1 HRGMv2_2932_1_199 205518 205976 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2932_1 HRGMv2_2932_1_200 206310 207800 + GH77
pfam HRGMv2_2932_1 HRGMv2_2932_1_201 207823 208428 + YitT_membrane
TC HRGMv2_2932_1 HRGMv2_2932_1_202 208543 209367 + 3.A.1.26.7
TC HRGMv2_2932_1 HRGMv2_2932_1_203 209352 210215 + 3.A.1.26.7
TC HRGMv2_2932_1 HRGMv2_2932_1_204 210208 210996 + 3.A.1.26.10
pfam HRGMv2_2932_1 HRGMv2_2932_1_205 211007 211558 + ECF-ribofla_trS | ECF_trnsprt
pfam HRGMv2_2932_1 HRGMv2_2932_1_206 211560 212144 + RrnaAD | PCMT | Ubie_methyltran | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC HRGMv2_2932_1 HRGMv2_2932_1_207 212165 212728 - 3.A.1.16.3
Gene ID: HRGMv2_2932_1_198
Type: TC
Location: 204658 - 205368 (-)
Gene ID: HRGMv2_2932_1_199
Type:
Location: 205518 - 205976 (+)
Gene ID: HRGMv2_2932_1_200
Type: CAZyme
Location: 206310 - 207800 (+)
Gene ID: HRGMv2_2932_1_201
Type: pfam
Location: 207823 - 208428 (+)
Gene ID: HRGMv2_2932_1_202
Type: TC
Location: 208543 - 209367 (+)
Gene ID: HRGMv2_2932_1_203
Type: TC
Location: 209352 - 210215 (+)
Gene ID: HRGMv2_2932_1_204
Type: TC
Location: 210208 - 210996 (+)
Gene ID: HRGMv2_2932_1_205
Type: pfam
Location: 211007 - 211558 (+)
Gene ID: HRGMv2_2932_1_206
Type: pfam
Location: 211560 - 212144 (+)
Gene ID: HRGMv2_2932_1_207
Type: TC
Location: 212165 - 212728 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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