Cluster: HRGMv2_2927_CGC9

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2927_8	HRGMv2_2927_8_8	10451	11419	+	3.A.1.1.29
TC	HRGMv2_2927_8	HRGMv2_2927_8_9	11432	12340	+	3.A.1.1.36
pfam	HRGMv2_2927_8	HRGMv2_2927_8_10	12419	13141	+	DUF624
TC	HRGMv2_2927_8	HRGMv2_2927_8_11	13128	14264	+	3.A.1.1.16
pfam	HRGMv2_2927_8	HRGMv2_2927_8_12	14425	15834	+	MatE \| MatE
CAZyme	HRGMv2_2927_8	HRGMv2_2927_8_13	15834	16697	+	CE4

Gene ID: HRGMv2_2927_8_8
Type: TC
Location: 10451 - 11419 (+)

Gene ID: HRGMv2_2927_8_9
Type: TC
Location: 11432 - 12340 (+)

Gene ID: HRGMv2_2927_8_10
Type: pfam
Location: 12419 - 13141 (+)

Gene ID: HRGMv2_2927_8_11
Type: TC
Location: 13128 - 14264 (+)

Gene ID: HRGMv2_2927_8_12
Type: pfam
Location: 14425 - 15834 (+)

Gene ID: HRGMv2_2927_8_13
Type: CAZyme
Location: 15834 - 16697 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2927_8_8	vegan > omnivore	2.22155	0.00435
HRGMv2_2927_8_8	vegetarian > omnivore	1.94697	0.00063
HRGMv2_2927_8_9	vegan > omnivore	2.16355	0.00435
HRGMv2_2927_8_9	vegetarian > omnivore	1.59468	0.00063
HRGMv2_2927_8_10	vegan > omnivore	3.35765	0.00435
HRGMv2_2927_8_10	vegetarian > omnivore	3.16061	0.00063
HRGMv2_2927_8_12	vegan > omnivore	2.46457	0.00435
HRGMv2_2927_8_12	vegetarian > omnivore	1.95331	0.00063
HRGMv2_2927_8_13	vegan > omnivore	3.46320	0.00435
HRGMv2_2927_8_13	vegetarian > omnivore	3.29684	0.00063