Cluster: HRGMv2_2927_CGC7
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2927
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2927_7 | HRGMv2_2927_7_31 | 32845 | 36006 | - | GH38 |
| NULL(UNKNOWN) | HRGMv2_2927_7 | HRGMv2_2927_7_32 | 36137 | 37381 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2927_7 | HRGMv2_2927_7_33 | 37489 | 38382 | - | PfkB |
| CAZyme | HRGMv2_2927_7 | HRGMv2_2927_7_34 | 38379 | 39794 | - | GH4 |
| pfam | HRGMv2_2927_7 | HRGMv2_2927_7_35 | 39797 | 40663 | - | IU_nuc_hydro |
| CAZyme | HRGMv2_2927_7 | HRGMv2_2927_7_36 | 40763 | 44047 | - | GH106 |
| NULL(UNKNOWN) | HRGMv2_2927_7 | HRGMv2_2927_7_37 | 44057 | 46234 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2927_7 | HRGMv2_2927_7_38 | 46305 | 47669 | - | SBP_bac_1 |
| TC | HRGMv2_2927_7 | HRGMv2_2927_7_39 | 47689 | 48654 | - | 3.A.1.1.39 |
| TC | HRGMv2_2927_7 | HRGMv2_2927_7_40 | 48668 | 49600 | - | 3.A.1.1.11 |
Gene ID: HRGMv2_2927_7_31
Type: CAZyme
Location: 32845 - 36006 (-)
Type: CAZyme
Location: 32845 - 36006 (-)
Gene ID: HRGMv2_2927_7_32
Type:
Location: 36137 - 37381 (-)
Type:
Location: 36137 - 37381 (-)
Gene ID: HRGMv2_2927_7_33
Type: STP
Location: 37489 - 38382 (-)
Type: STP
Location: 37489 - 38382 (-)
Gene ID: HRGMv2_2927_7_34
Type: CAZyme
Location: 38379 - 39794 (-)
Type: CAZyme
Location: 38379 - 39794 (-)
Gene ID: HRGMv2_2927_7_35
Type: pfam
Location: 39797 - 40663 (-)
Type: pfam
Location: 39797 - 40663 (-)
Gene ID: HRGMv2_2927_7_36
Type: CAZyme
Location: 40763 - 44047 (-)
Type: CAZyme
Location: 40763 - 44047 (-)
Gene ID: HRGMv2_2927_7_37
Type:
Location: 44057 - 46234 (-)
Type:
Location: 44057 - 46234 (-)
Gene ID: HRGMv2_2927_7_38
Type: STP
Location: 46305 - 47669 (-)
Type: STP
Location: 46305 - 47669 (-)
Gene ID: HRGMv2_2927_7_39
Type: TC
Location: 47689 - 48654 (-)
Type: TC
Location: 47689 - 48654 (-)
Gene ID: HRGMv2_2927_7_40
Type: TC
Location: 48668 - 49600 (-)
Type: TC
Location: 48668 - 49600 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900544405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2927_7_31 | vegan > omnivore | 3.56266 | 0.00435 |
| HRGMv2_2927_7_31 | vegetarian > omnivore | 3.86538 | 0.00063 |
| HRGMv2_2927_7_33 | vegan > omnivore | 5.11129 | 0.00435 |
| HRGMv2_2927_7_33 | vegetarian > omnivore | 5.44312 | 0.00063 |
| HRGMv2_2927_7_34 | vegan > omnivore | 4.63621 | 0.00435 |
| HRGMv2_2927_7_34 | vegetarian > omnivore | 4.62054 | 0.00063 |
| HRGMv2_2927_7_37 | vegan > omnivore | 4.98262 | 0.00435 |
| HRGMv2_2927_7_37 | vegetarian > omnivore | 4.74148 | 0.00063 |
| HRGMv2_2927_7_38 | vegan > omnivore | 5.60764 | 0.00435 |
| HRGMv2_2927_7_38 | vegetarian > omnivore | 4.89258 | 0.00063 |