Cluster: HRGMv2_2927_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2927
- CGC Family ID: CGCFAM_00377
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2927_7 | HRGMv2_2927_7_22 | 22081 | 23763 | + | GH2 |
| pfam | HRGMv2_2927_7 | HRGMv2_2927_7_23 | 23760 | 24293 | + | Imp-YgjV |
| TC | HRGMv2_2927_7 | HRGMv2_2927_7_24 | 24335 | 25681 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_2927_7_22
Type: CAZyme
Location: 22081 - 23763 (+)
Type: CAZyme
Location: 22081 - 23763 (+)
Gene ID: HRGMv2_2927_7_23
Type: pfam
Location: 23760 - 24293 (+)
Type: pfam
Location: 23760 - 24293 (+)
Gene ID: HRGMv2_2927_7_24
Type: TC
Location: 24335 - 25681 (-)
Type: TC
Location: 24335 - 25681 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900544405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2927_7_23 | vegan > omnivore | 3.36286 | 0.00435 |
| HRGMv2_2927_7_23 | vegetarian > omnivore | 3.43711 | 0.00063 |
| HRGMv2_2927_7_24 | vegan > omnivore | 4.04675 | 0.00435 |
| HRGMv2_2927_7_24 | vegetarian > omnivore | 3.85597 | 0.00063 |