Cluster: HRGMv2_2927_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2927
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2927_6 | HRGMv2_2927_6_29 | 36383 | 37360 | + | 9.B.146.1.3 |
| TC | HRGMv2_2927_6 | HRGMv2_2927_6_30 | 37401 | 38591 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2927_6 | HRGMv2_2927_6_31 | 38588 | 39718 | + | GT28 |
Gene ID: HRGMv2_2927_6_29
Type: TC
Location: 36383 - 37360 (+)
Type: TC
Location: 36383 - 37360 (+)
Gene ID: HRGMv2_2927_6_30
Type: TC
Location: 37401 - 38591 (+)
Type: TC
Location: 37401 - 38591 (+)
Gene ID: HRGMv2_2927_6_31
Type: CAZyme
Location: 38588 - 39718 (+)
Type: CAZyme
Location: 38588 - 39718 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900544405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2927_6_31 | vegan > omnivore | 2.55050 | 0.00435 |
| HRGMv2_2927_6_31 | vegetarian > omnivore | 2.74390 | 0.00063 |