Cluster: HRGMv2_2927_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2927
- CGC Family ID: CGCFAM_00093
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2927_2 | HRGMv2_2927_2_33 | 33148 | 34521 | - | 2.A.50.2.1 |
| NULL(UNKNOWN) | HRGMv2_2927_2 | HRGMv2_2927_2_34 | 34518 | 34751 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2927_2 | HRGMv2_2927_2_35 | 34748 | 36508 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2927_2 | HRGMv2_2927_2_36 | 36770 | 39910 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_2927_2 | HRGMv2_2927_2_37 | 39913 | 40383 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2927_2 | HRGMv2_2927_2_38 | 40524 | 42908 | + | GH2 |
| CAZyme | HRGMv2_2927_2 | HRGMv2_2927_2_39 | 42902 | 45460 | + | CBM67 | GH78 |
Gene ID: HRGMv2_2927_2_33
Type: TC
Location: 33148 - 34521 (-)
Type: TC
Location: 33148 - 34521 (-)
Gene ID: HRGMv2_2927_2_34
Type:
Location: 34518 - 34751 (-)
Type:
Location: 34518 - 34751 (-)
Gene ID: HRGMv2_2927_2_35
Type:
Location: 34748 - 36508 (-)
Type:
Location: 34748 - 36508 (-)
Gene ID: HRGMv2_2927_2_36
Type: CAZyme
Location: 36770 - 39910 (+)
Type: CAZyme
Location: 36770 - 39910 (+)
Gene ID: HRGMv2_2927_2_37
Type:
Location: 39913 - 40383 (+)
Type:
Location: 39913 - 40383 (+)
Gene ID: HRGMv2_2927_2_38
Type: CAZyme
Location: 40524 - 42908 (+)
Type: CAZyme
Location: 40524 - 42908 (+)
Gene ID: HRGMv2_2927_2_39
Type: CAZyme
Location: 42902 - 45460 (+)
Type: CAZyme
Location: 42902 - 45460 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900544405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2927_2_33 | vegan > omnivore | 2.44832 | 0.00435 |
| HRGMv2_2927_2_33 | vegetarian > omnivore | 2.73770 | 0.00063 |
| HRGMv2_2927_2_34 | vegan > omnivore | 3.75879 | 0.00435 |
| HRGMv2_2927_2_34 | vegetarian > omnivore | 3.83669 | 0.00063 |
| HRGMv2_2927_2_35 | vegan > omnivore | 4.63858 | 0.00435 |
| HRGMv2_2927_2_35 | vegetarian > omnivore | 4.55385 | 0.00063 |
| HRGMv2_2927_2_37 | vegan > omnivore | 5.75746 | 0.00435 |
| HRGMv2_2927_2_37 | vegetarian > omnivore | 5.84887 | 0.00063 |
| HRGMv2_2927_2_38 | vegan > omnivore | 1.36372 | 0.00066 |
| HRGMv2_2927_2_39 | vegan > omnivore | 1.80727 | 0.00435 |