Cluster: HRGMv2_2927_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2927
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2927_47 | HRGMv2_2927_47_1 | 387 | 1928 | - | 2.A.15.1.11 |
| pfam | HRGMv2_2927_47 | HRGMv2_2927_47_2 | 1921 | 2646 | - | NTP_transferase | NTP_transf_3 |
| STP | HRGMv2_2927_47 | HRGMv2_2927_47_3 | 2643 | 4385 | - | HTH_IclR |
| CAZyme | HRGMv2_2927_47 | HRGMv2_2927_47_4 | 4615 | 6627 | - | GH13_8 |
Gene ID: HRGMv2_2927_47_1
Type: TC
Location: 387 - 1928 (-)
Type: TC
Location: 387 - 1928 (-)
Gene ID: HRGMv2_2927_47_2
Type: pfam
Location: 1921 - 2646 (-)
Type: pfam
Location: 1921 - 2646 (-)
Gene ID: HRGMv2_2927_47_3
Type: STP
Location: 2643 - 4385 (-)
Type: STP
Location: 2643 - 4385 (-)
Gene ID: HRGMv2_2927_47_4
Type: CAZyme
Location: 4615 - 6627 (-)
Type: CAZyme
Location: 4615 - 6627 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900544405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2927_47_3 | vegan > omnivore | 1.14719 | 0.00435 |
| HRGMv2_2927_47_3 | vegetarian > omnivore | 1.69990 | 0.00063 |