dbCAN HGM

Cluster: HRGMv2_2927_CGC17

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2927_33	HRGMv2_2927_33_2	1357	2739	-	2.A.66.1.23
pfam	HRGMv2_2927_33	HRGMv2_2927_33_3	3079	3273	-	FeThRed_B
TC	HRGMv2_2927_33	HRGMv2_2927_33_4	3292	5565	-	3.A.9.1.2
pfam	HRGMv2_2927_33	HRGMv2_2927_33_5	5647	6423	-	PseudoU_synth_1 \| PseudoU_synth_1
TC	HRGMv2_2927_33	HRGMv2_2927_33_6	6430	7236	-	3.A.1.25.4
TC	HRGMv2_2927_33	HRGMv2_2927_33_7	7230	8090	-	3.A.1.26.7
TC	HRGMv2_2927_33	HRGMv2_2927_33_8	8109	8957	-	3.A.1.26.7
pfam	HRGMv2_2927_33	HRGMv2_2927_33_9	8970	9839	-	Cons_hypoth95 \| Methyltrans_SAM
CAZyme	HRGMv2_2927_33	HRGMv2_2927_33_10	9858	12614	-	GT51

Gene ID: HRGMv2_2927_33_2
Type: TC
Location: 1357 - 2739 (-)

Gene ID: HRGMv2_2927_33_3
Type: pfam
Location: 3079 - 3273 (-)

Gene ID: HRGMv2_2927_33_4
Type: TC
Location: 3292 - 5565 (-)

Gene ID: HRGMv2_2927_33_5
Type: pfam
Location: 5647 - 6423 (-)

Gene ID: HRGMv2_2927_33_6
Type: TC
Location: 6430 - 7236 (-)

Gene ID: HRGMv2_2927_33_7
Type: TC
Location: 7230 - 8090 (-)

Gene ID: HRGMv2_2927_33_8
Type: TC
Location: 8109 - 8957 (-)

Gene ID: HRGMv2_2927_33_9
Type: pfam
Location: 8970 - 9839 (-)

Gene ID: HRGMv2_2927_33_10
Type: CAZyme
Location: 9858 - 12614 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2927_33_2	vegan > omnivore	2.01009	0.00435
HRGMv2_2927_33_2	vegetarian > omnivore	1.91282	0.00063
HRGMv2_2927_33_3	vegetarian > omnivore	1.29860	0.00063
HRGMv2_2927_33_5	vegan > omnivore	1.96928	0.00066
HRGMv2_2927_33_5	vegetarian > omnivore	1.81103	0.00063
HRGMv2_2927_33_10	vegan > omnivore	1.85113	0.00435
HRGMv2_2927_33_10	vegetarian > omnivore	1.60535	0.00063