dbCAN HGM

Cluster: HRGMv2_2927_CGC14

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2927_16	HRGMv2_2927_16_23	27702	29087	-	2.A.66.1.28
CAZyme	HRGMv2_2927_16	HRGMv2_2927_16_24	29327	30457	-	CE9
NULL(UNKNOWN)	HRGMv2_2927_16	HRGMv2_2927_16_25	30540	31922	-	NULL(UNKNOWN) [View Structural Homologs]
pfam	HRGMv2_2927_16	HRGMv2_2927_16_26	31944	33026	-	APH
TC	HRGMv2_2927_16	HRGMv2_2927_16_27	33156	34304	-	2.A.103.1.3
pfam	HRGMv2_2927_16	HRGMv2_2927_16_28	34685	35488	-	GDPD
TC	HRGMv2_2927_16	HRGMv2_2927_16_29	35492	36808	-	2.A.1.2.88
TC	HRGMv2_2927_16	HRGMv2_2927_16_30	36967	37524	+	2.A.51.1.6
TC	HRGMv2_2927_16	HRGMv2_2927_16_31	37521	38090	+	2.A.51.1.6

Gene ID: HRGMv2_2927_16_23
Type: TC
Location: 27702 - 29087 (-)

Gene ID: HRGMv2_2927_16_24
Type: CAZyme
Location: 29327 - 30457 (-)

Gene ID: HRGMv2_2927_16_25
Type:
Location: 30540 - 31922 (-)

Gene ID: HRGMv2_2927_16_26
Type: pfam
Location: 31944 - 33026 (-)

Gene ID: HRGMv2_2927_16_27
Type: TC
Location: 33156 - 34304 (-)

Gene ID: HRGMv2_2927_16_28
Type: pfam
Location: 34685 - 35488 (-)

Gene ID: HRGMv2_2927_16_29
Type: TC
Location: 35492 - 36808 (-)

Gene ID: HRGMv2_2927_16_30
Type: TC
Location: 36967 - 37524 (+)

Gene ID: HRGMv2_2927_16_31
Type: TC
Location: 37521 - 38090 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2927_16_23	vegetarian > omnivore	1.27503	0.00063
HRGMv2_2927_16_24	vegetarian > omnivore	1.04380	0.00063
HRGMv2_2927_16_26	vegan > omnivore	1.25862	0.00435
HRGMv2_2927_16_26	vegetarian > omnivore	1.58946	0.00063
HRGMv2_2927_16_27	vegan > omnivore	2.05305	0.00435
HRGMv2_2927_16_27	vegetarian > omnivore	3.11899	0.00063
HRGMv2_2927_16_27	vegetarian > vegan	1.06594	0.00701
HRGMv2_2927_16_28	vegan > omnivore	2.48299	0.00435
HRGMv2_2927_16_28	vegetarian > omnivore	2.68121	0.00063