dbCAN HGM

Cluster: HRGMv2_2927_CGC11

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_2927_9	HRGMv2_2927_9_36	39251	40861	-	GH66
TC	HRGMv2_2927_9	HRGMv2_2927_9_37	40858	41727	-	3.A.1.1.18
TC	HRGMv2_2927_9	HRGMv2_2927_9_38	41730	42662	-	3.A.1.1.34
STP	HRGMv2_2927_9	HRGMv2_2927_9_39	42723	44030	-	SBP_bac_1
CAZyme	HRGMv2_2927_9	HRGMv2_2927_9_40	44486	49762	+	CBM35 \| CBM35 \| GH15 \| GH66 \| GH66
pfam	HRGMv2_2927_9	HRGMv2_2927_9_41	49894	50880	-	BPD_transp_2
TC	HRGMv2_2927_9	HRGMv2_2927_9_42	50870	51964	-	3.A.1.2.10
TC	HRGMv2_2927_9	HRGMv2_2927_9_43	51957	53492	-	3.A.1.2.12

Gene ID: HRGMv2_2927_9_36
Type: CAZyme
Location: 39251 - 40861 (-)

Gene ID: HRGMv2_2927_9_37
Type: TC
Location: 40858 - 41727 (-)

Gene ID: HRGMv2_2927_9_38
Type: TC
Location: 41730 - 42662 (-)

Gene ID: HRGMv2_2927_9_39
Type: STP
Location: 42723 - 44030 (-)

Gene ID: HRGMv2_2927_9_40
Type: CAZyme
Location: 44486 - 49762 (+)

Gene ID: HRGMv2_2927_9_41
Type: pfam
Location: 49894 - 50880 (-)

Gene ID: HRGMv2_2927_9_42
Type: TC
Location: 50870 - 51964 (-)

Gene ID: HRGMv2_2927_9_43
Type: TC
Location: 51957 - 53492 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2927_9_37	vegetarian > vegan	1.30217	0.00701
HRGMv2_2927_9_38	vegetarian > vegan	1.24667	0.00701
HRGMv2_2927_9_39	vegetarian > vegan	1.05973	0.00701
HRGMv2_2927_9_40	vegan > omnivore	2.18741	0.00435
HRGMv2_2927_9_40	vegetarian > omnivore	2.07064	0.00063