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Cluster: HRGMv2_2921_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2921_4 HRGMv2_2921_4_41 35123 36043 - GH25
STP HRGMv2_2921_4 HRGMv2_2921_4_42 36230 36469 + HMA
TC HRGMv2_2921_4 HRGMv2_2921_4_43 36551 37924 - 3.A.1.122.2
NULL(UNKNOWN) HRGMv2_2921_4 HRGMv2_2921_4_44 37974 39845 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2921_4 HRGMv2_2921_4_45 39857 40600 - 3.A.1.122.14
pfam HRGMv2_2921_4 HRGMv2_2921_4_46 41314 42723 - GHL10
TC HRGMv2_2921_4 HRGMv2_2921_4_47 42987 44879 - 9.B.18.2.1
TC HRGMv2_2921_4 HRGMv2_2921_4_48 45059 45688 - 3.A.1.16.4
Gene ID: HRGMv2_2921_4_41
Type: CAZyme
Location: 35123 - 36043 (-)
Gene ID: HRGMv2_2921_4_42
Type: STP
Location: 36230 - 36469 (+)
Gene ID: HRGMv2_2921_4_43
Type: TC
Location: 36551 - 37924 (-)
Gene ID: HRGMv2_2921_4_44
Type:
Location: 37974 - 39845 (-)
Gene ID: HRGMv2_2921_4_45
Type: TC
Location: 39857 - 40600 (-)
Gene ID: HRGMv2_2921_4_46
Type: pfam
Location: 41314 - 42723 (-)
Gene ID: HRGMv2_2921_4_47
Type: TC
Location: 42987 - 44879 (-)
Gene ID: HRGMv2_2921_4_48
Type: TC
Location: 45059 - 45688 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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