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Cluster: HRGMv2_2921_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2921_33 HRGMv2_2921_33_17 14862 16307 + 2.A.36.6.11
pfam HRGMv2_2921_33 HRGMv2_2921_33_18 16374 19001 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2
NULL(UNKNOWN) HRGMv2_2921_33 HRGMv2_2921_33_19 19141 19632 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2921_33 HRGMv2_2921_33_20 19779 21446 - 2.A.58.2.2
pfam HRGMv2_2921_33 HRGMv2_2921_33_21 21759 22877 + DUF3810
CAZyme HRGMv2_2921_33 HRGMv2_2921_33_22 23005 23916 - CE4
Gene ID: HRGMv2_2921_33_17
Type: TC
Location: 14862 - 16307 (+)
Gene ID: HRGMv2_2921_33_18
Type: pfam
Location: 16374 - 19001 (-)
Gene ID: HRGMv2_2921_33_19
Type:
Location: 19141 - 19632 (-)
Gene ID: HRGMv2_2921_33_20
Type: TC
Location: 19779 - 21446 (-)
Gene ID: HRGMv2_2921_33_21
Type: pfam
Location: 21759 - 22877 (+)
Gene ID: HRGMv2_2921_33_22
Type: CAZyme
Location: 23005 - 23916 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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