dbCAN Logo

Cluster: HRGMv2_2921_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2921_2 HRGMv2_2921_2_152 172975 173967 - 3.A.1.2.13
TC HRGMv2_2921_2 HRGMv2_2921_2_153 174025 175071 - 3.A.1.2.18
TC HRGMv2_2921_2 HRGMv2_2921_2_154 175125 176642 - 3.A.1.2.1
pfam HRGMv2_2921_2 HRGMv2_2921_2_155 176966 178480 - ABC_tran
TC HRGMv2_2921_2 HRGMv2_2921_2_156 178477 179514 - 8.A.59.2.1
TF HRGMv2_2921_2 HRGMv2_2921_2_157 179534 181198 - HTH_AraC | HTH_AraC
pfam HRGMv2_2921_2 HRGMv2_2921_2_158 181471 182670 + ROK | MarR_2
CAZyme HRGMv2_2921_2 HRGMv2_2921_2_159 183198 189245 + CBM6 | GH92
Gene ID: HRGMv2_2921_2_152
Type: TC
Location: 172975 - 173967 (-)
Gene ID: HRGMv2_2921_2_153
Type: TC
Location: 174025 - 175071 (-)
Gene ID: HRGMv2_2921_2_154
Type: TC
Location: 175125 - 176642 (-)
Gene ID: HRGMv2_2921_2_155
Type: pfam
Location: 176966 - 178480 (-)
Gene ID: HRGMv2_2921_2_156
Type: TC
Location: 178477 - 179514 (-)
Gene ID: HRGMv2_2921_2_157
Type: TF
Location: 179534 - 181198 (-)
Gene ID: HRGMv2_2921_2_158
Type: pfam
Location: 181471 - 182670 (+)
Gene ID: HRGMv2_2921_2_159
Type: CAZyme
Location: 183198 - 189245 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List