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Cluster: HRGMv2_2921_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2921_11 HRGMv2_2921_11_93 78638 85312 + CBM51 | GH2 | GH2
STP HRGMv2_2921_11 HRGMv2_2921_11_94 85569 86567 + Peripla_BP_1
TC HRGMv2_2921_11 HRGMv2_2921_11_95 86585 88099 + 8.A.59.2.1
TF HRGMv2_2921_11 HRGMv2_2921_11_96 88189 89796 + HTH_AraC | HTH_AraC
TC HRGMv2_2921_11 HRGMv2_2921_11_97 89796 90842 + 3.A.1.2.26
CAZyme HRGMv2_2921_11 HRGMv2_2921_11_98 90994 95574 + CBM35 | CBM35 | CBM6 | GH31
Gene ID: HRGMv2_2921_11_93
Type: CAZyme
Location: 78638 - 85312 (+)
Gene ID: HRGMv2_2921_11_94
Type: STP
Location: 85569 - 86567 (+)
Gene ID: HRGMv2_2921_11_95
Type: TC
Location: 86585 - 88099 (+)
Gene ID: HRGMv2_2921_11_96
Type: TF
Location: 88189 - 89796 (+)
Gene ID: HRGMv2_2921_11_97
Type: TC
Location: 89796 - 90842 (+)
Gene ID: HRGMv2_2921_11_98
Type: CAZyme
Location: 90994 - 95574 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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