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Cluster: HRGMv2_2921_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2921_7 HRGMv2_2921_7_103 98423 100153 - 8.A.59.2.1
TF HRGMv2_2921_7 HRGMv2_2921_7_104 100155 101663 - HTH_AraC | HTH_AraC
TC HRGMv2_2921_7 HRGMv2_2921_7_105 101844 103532 + 3.A.1.1.9
CAZyme HRGMv2_2921_7 HRGMv2_2921_7_106 103855 107241 + GH13_36
TF HRGMv2_2921_7 HRGMv2_2921_7_107 107519 107770 - SpoVT_AbrB
TC HRGMv2_2921_7 HRGMv2_2921_7_108 107938 108519 + 9.B.156.3.1
TC HRGMv2_2921_7 HRGMv2_2921_7_109 108512 109036 + 9.B.156.3.1
TC HRGMv2_2921_7 HRGMv2_2921_7_110 109052 110908 + 9.A.8.1.6
Gene ID: HRGMv2_2921_7_103
Type: TC
Location: 98423 - 100153 (-)
Gene ID: HRGMv2_2921_7_104
Type: TF
Location: 100155 - 101663 (-)
Gene ID: HRGMv2_2921_7_105
Type: TC
Location: 101844 - 103532 (+)
Gene ID: HRGMv2_2921_7_106
Type: CAZyme
Location: 103855 - 107241 (+)
Gene ID: HRGMv2_2921_7_107
Type: TF
Location: 107519 - 107770 (-)
Gene ID: HRGMv2_2921_7_108
Type: TC
Location: 107938 - 108519 (+)
Gene ID: HRGMv2_2921_7_109
Type: TC
Location: 108512 - 109036 (+)
Gene ID: HRGMv2_2921_7_110
Type: TC
Location: 109052 - 110908 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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