Cluster: HRGMv2_2920_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2920
- CGC Family ID: CGCFAM_00004
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2920_4 | HRGMv2_2920_4_6 | 8405 | 9532 | + | 2.A.45.2.6 |
| CAZyme | HRGMv2_2920_4 | HRGMv2_2920_4_7 | 9626 | 11053 | - | GT5 |
| pfam | HRGMv2_2920_4 | HRGMv2_2920_4_8 | 11123 | 12235 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_2920_4 | HRGMv2_2920_4_9 | 12235 | 13446 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_2920_4 | HRGMv2_2920_4_10 | 13539 | 15557 | - | GH13_9 |
Gene ID: HRGMv2_2920_4_6
Type: TC
Location: 8405 - 9532 (+)
Type: TC
Location: 8405 - 9532 (+)
Gene ID: HRGMv2_2920_4_7
Type: CAZyme
Location: 9626 - 11053 (-)
Type: CAZyme
Location: 9626 - 11053 (-)
Gene ID: HRGMv2_2920_4_8
Type: pfam
Location: 11123 - 12235 (-)
Type: pfam
Location: 11123 - 12235 (-)
Gene ID: HRGMv2_2920_4_9
Type: pfam
Location: 12235 - 13446 (-)
Type: pfam
Location: 12235 - 13446 (-)
Gene ID: HRGMv2_2920_4_10
Type: CAZyme
Location: 13539 - 15557 (-)
Type: CAZyme
Location: 13539 - 15557 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Acutalibacter
Species
Acutalibacter stercorigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.