Cluster: HRGMv2_2920_CGC30
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2920
- CGC Family ID: CGCFAM_03953
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2920_22 | HRGMv2_2920_22_13 | 15458 | 16420 | + | GT2 |
| STP | HRGMv2_2920_22 | HRGMv2_2920_22_14 | 16489 | 17463 | - | PfkB |
| CAZyme | HRGMv2_2920_22 | HRGMv2_2920_22_15 | 17594 | 18244 | - | CBM13 |
| TC | HRGMv2_2920_22 | HRGMv2_2920_22_16 | 18554 | 21010 | + | 3.A.3.23.2 |
| NULL(UNKNOWN) | HRGMv2_2920_22 | HRGMv2_2920_22_17 | 21154 | 21528 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2920_22 | HRGMv2_2920_22_18 | 21579 | 22241 | - | Pribosyltran |
| TC | HRGMv2_2920_22 | HRGMv2_2920_22_19 | 22264 | 23277 | - | 3.A.11.1.4 |
Gene ID: HRGMv2_2920_22_13
Type: CAZyme
Location: 15458 - 16420 (+)
Type: CAZyme
Location: 15458 - 16420 (+)
Gene ID: HRGMv2_2920_22_14
Type: STP
Location: 16489 - 17463 (-)
Type: STP
Location: 16489 - 17463 (-)
Gene ID: HRGMv2_2920_22_15
Type: CAZyme
Location: 17594 - 18244 (-)
Type: CAZyme
Location: 17594 - 18244 (-)
Gene ID: HRGMv2_2920_22_16
Type: TC
Location: 18554 - 21010 (+)
Type: TC
Location: 18554 - 21010 (+)
Gene ID: HRGMv2_2920_22_17
Type:
Location: 21154 - 21528 (+)
Type:
Location: 21154 - 21528 (+)
Gene ID: HRGMv2_2920_22_18
Type: STP
Location: 21579 - 22241 (-)
Type: STP
Location: 21579 - 22241 (-)
Gene ID: HRGMv2_2920_22_19
Type: TC
Location: 22264 - 23277 (-)
Type: TC
Location: 22264 - 23277 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Acutalibacter
Species
Acutalibacter stercorigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.