dbCAN Logo

Cluster: HRGMv2_2920_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2920_16 HRGMv2_2920_16_1 1 1977 + GH2
pfam HRGMv2_2920_16 HRGMv2_2920_16_2 2185 3366 - Fe-ADH | Fe-ADH_2 | ADH_Fe_C
TC HRGMv2_2920_16 HRGMv2_2920_16_3 3531 3989 + 9.A.11.1.1
TC HRGMv2_2920_16 HRGMv2_2920_16_4 3986 4990 + 9.A.11.1.1
pfam HRGMv2_2920_16 HRGMv2_2920_16_5 5143 6654 - PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
TC HRGMv2_2920_16 HRGMv2_2920_16_6 6835 7488 - 2.A.115.1.2
TF HRGMv2_2920_16 HRGMv2_2920_16_7 7570 8394 + MerR
TC HRGMv2_2920_16 HRGMv2_2920_16_8 9290 11602 - 3.A.9.1.2
TC HRGMv2_2920_16 HRGMv2_2920_16_9 11771 12418 - 4.F.1.1.7
Gene ID: HRGMv2_2920_16_1
Type: CAZyme
Location: 1 - 1977 (+)
Gene ID: HRGMv2_2920_16_2
Type: pfam
Location: 2185 - 3366 (-)
Gene ID: HRGMv2_2920_16_3
Type: TC
Location: 3531 - 3989 (+)
Gene ID: HRGMv2_2920_16_4
Type: TC
Location: 3986 - 4990 (+)
Gene ID: HRGMv2_2920_16_5
Type: pfam
Location: 5143 - 6654 (-)
Gene ID: HRGMv2_2920_16_6
Type: TC
Location: 6835 - 7488 (-)
Gene ID: HRGMv2_2920_16_7
Type: TF
Location: 7570 - 8394 (+)
Gene ID: HRGMv2_2920_16_8
Type: TC
Location: 9290 - 11602 (-)
Gene ID: HRGMv2_2920_16_9
Type: TC
Location: 11771 - 12418 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List