Cluster: HRGMv2_2920_CGC24
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2920
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2920_14 | HRGMv2_2920_14_5 | 4333 | 6300 | + | GH39 |
| CAZyme | HRGMv2_2920_14 | HRGMv2_2920_14_6 | 6563 | 7666 | + | GH179 |
| pfam | HRGMv2_2920_14 | HRGMv2_2920_14_7 | 7679 | 8551 | + | AP_endonuc_2 |
| pfam | HRGMv2_2920_14 | HRGMv2_2920_14_8 | 8564 | 9004 | + | CGDB |
| TC | HRGMv2_2920_14 | HRGMv2_2920_14_9 | 9023 | 9466 | + | 3.A.1.1.10 |
| NULL(UNKNOWN) | HRGMv2_2920_14 | HRGMv2_2920_14_10 | 9506 | 9808 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2920_14 | HRGMv2_2920_14_11 | 9847 | 10155 | + | DUF3502 |
| CAZyme | HRGMv2_2920_14 | HRGMv2_2920_14_12 | 10258 | 11970 | + | GH5_46 |
| peptidase | HRGMv2_2920_14 | HRGMv2_2920_14_13 | 11987 | 13564 | + | S09.UNW |
| TC | HRGMv2_2920_14 | HRGMv2_2920_14_14 | 13589 | 14959 | + | 2.A.66.1.2 |
| pfam | HRGMv2_2920_14 | HRGMv2_2920_14_15 | 15034 | 15588 | - | Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_10 |
| TC | HRGMv2_2920_14 | HRGMv2_2920_14_16 | 15747 | 16772 | + | 1.A.33.1.5 |
Gene ID: HRGMv2_2920_14_5
Type: CAZyme
Location: 4333 - 6300 (+)
Type: CAZyme
Location: 4333 - 6300 (+)
Gene ID: HRGMv2_2920_14_6
Type: CAZyme
Location: 6563 - 7666 (+)
Type: CAZyme
Location: 6563 - 7666 (+)
Gene ID: HRGMv2_2920_14_7
Type: pfam
Location: 7679 - 8551 (+)
Type: pfam
Location: 7679 - 8551 (+)
Gene ID: HRGMv2_2920_14_8
Type: pfam
Location: 8564 - 9004 (+)
Type: pfam
Location: 8564 - 9004 (+)
Gene ID: HRGMv2_2920_14_9
Type: TC
Location: 9023 - 9466 (+)
Type: TC
Location: 9023 - 9466 (+)
Gene ID: HRGMv2_2920_14_10
Type:
Location: 9506 - 9808 (+)
Type:
Location: 9506 - 9808 (+)
Gene ID: HRGMv2_2920_14_11
Type: pfam
Location: 9847 - 10155 (+)
Type: pfam
Location: 9847 - 10155 (+)
Gene ID: HRGMv2_2920_14_12
Type: CAZyme
Location: 10258 - 11970 (+)
Type: CAZyme
Location: 10258 - 11970 (+)
Gene ID: HRGMv2_2920_14_13
Type: peptidase
Location: 11987 - 13564 (+)
Type: peptidase
Location: 11987 - 13564 (+)
Gene ID: HRGMv2_2920_14_14
Type: TC
Location: 13589 - 14959 (+)
Type: TC
Location: 13589 - 14959 (+)
Gene ID: HRGMv2_2920_14_15
Type: pfam
Location: 15034 - 15588 (-)
Type: pfam
Location: 15034 - 15588 (-)
Gene ID: HRGMv2_2920_14_16
Type: TC
Location: 15747 - 16772 (+)
Type: TC
Location: 15747 - 16772 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Acutalibacter
Species
Acutalibacter stercorigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.