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Cluster: HRGMv2_2920_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2920_9 HRGMv2_2920_9_1 53 1750 - 8.A.59.2.1
TC HRGMv2_2920_9 HRGMv2_2920_9_2 1927 2865 + 3.A.1.1.29
TC HRGMv2_2920_9 HRGMv2_2920_9_3 2894 3808 + 3.A.1.1.29
STP HRGMv2_2920_9 HRGMv2_2920_9_4 3877 5523 + SBP_bac_1
pfam HRGMv2_2920_9 HRGMv2_2920_9_5 5652 7538 + Trehalase | Glyco_hydro_63 | MGH1-like_GH
CAZyme HRGMv2_2920_9 HRGMv2_2920_9_6 7564 9120 + GH63
CAZyme HRGMv2_2920_9 HRGMv2_2920_9_7 9130 11139 + GH36
pfam HRGMv2_2920_9 HRGMv2_2920_9_8 11201 11929 + AP_endonuc_2
CAZyme HRGMv2_2920_9 HRGMv2_2920_9_9 11961 13085 + GH179
Gene ID: HRGMv2_2920_9_1
Type: TC
Location: 53 - 1750 (-)
Gene ID: HRGMv2_2920_9_2
Type: TC
Location: 1927 - 2865 (+)
Gene ID: HRGMv2_2920_9_3
Type: TC
Location: 2894 - 3808 (+)
Gene ID: HRGMv2_2920_9_4
Type: STP
Location: 3877 - 5523 (+)
Gene ID: HRGMv2_2920_9_5
Type: pfam
Location: 5652 - 7538 (+)
Gene ID: HRGMv2_2920_9_6
Type: CAZyme
Location: 7564 - 9120 (+)
Gene ID: HRGMv2_2920_9_7
Type: CAZyme
Location: 9130 - 11139 (+)
Gene ID: HRGMv2_2920_9_8
Type: pfam
Location: 11201 - 11929 (+)
Gene ID: HRGMv2_2920_9_9
Type: CAZyme
Location: 11961 - 13085 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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