dbCAN Logo

Cluster: HRGMv2_2920_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2920_7 HRGMv2_2920_7_74 78867 79832 + 3.A.1.1.10
TC HRGMv2_2920_7 HRGMv2_2920_7_75 79852 80757 + 3.A.1.1.29
STP HRGMv2_2920_7 HRGMv2_2920_7_76 80793 82376 + SBP_bac_1
CAZyme HRGMv2_2920_7 HRGMv2_2920_7_77 82477 83547 + GH130
CAZyme HRGMv2_2920_7 HRGMv2_2920_7_78 83571 84521 + GT108
TF HRGMv2_2920_7 HRGMv2_2920_7_79 84582 86504 + HTH_AraC
TC HRGMv2_2920_7 HRGMv2_2920_7_80 86594 87199 - 2.A.115.2.14
TC HRGMv2_2920_7 HRGMv2_2920_7_81 87216 88574 - 2.A.45.2.2
Gene ID: HRGMv2_2920_7_74
Type: TC
Location: 78867 - 79832 (+)
Gene ID: HRGMv2_2920_7_75
Type: TC
Location: 79852 - 80757 (+)
Gene ID: HRGMv2_2920_7_76
Type: STP
Location: 80793 - 82376 (+)
Gene ID: HRGMv2_2920_7_77
Type: CAZyme
Location: 82477 - 83547 (+)
Gene ID: HRGMv2_2920_7_78
Type: CAZyme
Location: 83571 - 84521 (+)
Gene ID: HRGMv2_2920_7_79
Type: TF
Location: 84582 - 86504 (+)
Gene ID: HRGMv2_2920_7_80
Type: TC
Location: 86594 - 87199 (-)
Gene ID: HRGMv2_2920_7_81
Type: TC
Location: 87216 - 88574 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List