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Cluster: HRGMv2_2919_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2919_4 HRGMv2_2919_4_136 133303 135033 + 4.C.1.1.4
TC HRGMv2_2919_4 HRGMv2_2919_4_137 135030 135743 + 9.B.169.2.2
pfam HRGMv2_2919_4 HRGMv2_2919_4_138 136042 137049 - RNase_T
pfam HRGMv2_2919_4 HRGMv2_2919_4_139 137153 137785 - Rubrerythrin | RUBY_RBDX
CAZyme HRGMv2_2919_4 HRGMv2_2919_4_140 138177 145478 + GH85
STP HRGMv2_2919_4 HRGMv2_2919_4_141 145627 147468 - SIS | SIS
pfam HRGMv2_2919_4 HRGMv2_2919_4_142 147617 148504 - DNA_processg_A
TC HRGMv2_2919_4 HRGMv2_2919_4_143 148501 149688 - 3.A.18.1.1
Gene ID: HRGMv2_2919_4_136
Type: TC
Location: 133303 - 135033 (+)
Gene ID: HRGMv2_2919_4_137
Type: TC
Location: 135030 - 135743 (+)
Gene ID: HRGMv2_2919_4_138
Type: pfam
Location: 136042 - 137049 (-)
Gene ID: HRGMv2_2919_4_139
Type: pfam
Location: 137153 - 137785 (-)
Gene ID: HRGMv2_2919_4_140
Type: CAZyme
Location: 138177 - 145478 (+)
Gene ID: HRGMv2_2919_4_141
Type: STP
Location: 145627 - 147468 (-)
Gene ID: HRGMv2_2919_4_142
Type: pfam
Location: 147617 - 148504 (-)
Gene ID: HRGMv2_2919_4_143
Type: TC
Location: 148501 - 149688 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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