Cluster: HRGMv2_2919_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2919
- CGC Family ID: CGCFAM_00231
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2919_3 | HRGMv2_2919_3_224 | 218834 | 220045 | - | 3.B.1.1.2 |
| TC | HRGMv2_2919_3 | HRGMv2_2919_3_225 | 220058 | 220450 | - | 3.B.1.1.2 |
| pfam | HRGMv2_2919_3 | HRGMv2_2919_3_226 | 220453 | 220791 | - | OAD_gamma |
| TC | HRGMv2_2919_3 | HRGMv2_2919_3_227 | 220805 | 222208 | - | 3.B.1.1.6 |
| pfam | HRGMv2_2919_3 | HRGMv2_2919_3_228 | 222459 | 224066 | - | PEPCK_ATP |
| CAZyme | HRGMv2_2919_3 | HRGMv2_2919_3_229 | 224363 | 225079 | - | CE4 |
Gene ID: HRGMv2_2919_3_224
Type: TC
Location: 218834 - 220045 (-)
Type: TC
Location: 218834 - 220045 (-)
Gene ID: HRGMv2_2919_3_225
Type: TC
Location: 220058 - 220450 (-)
Type: TC
Location: 220058 - 220450 (-)
Gene ID: HRGMv2_2919_3_226
Type: pfam
Location: 220453 - 220791 (-)
Type: pfam
Location: 220453 - 220791 (-)
Gene ID: HRGMv2_2919_3_227
Type: TC
Location: 220805 - 222208 (-)
Type: TC
Location: 220805 - 222208 (-)
Gene ID: HRGMv2_2919_3_228
Type: pfam
Location: 222459 - 224066 (-)
Type: pfam
Location: 222459 - 224066 (-)
Gene ID: HRGMv2_2919_3_229
Type: CAZyme
Location: 224363 - 225079 (-)
Type: CAZyme
Location: 224363 - 225079 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia gallistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.