Cluster: HRGMv2_2919_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2919
- CGC Family ID: CGCFAM_02682
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2919_3 | HRGMv2_2919_3_85 | 103935 | 106268 | - | GT35 |
| CAZyme | HRGMv2_2919_3 | HRGMv2_2919_3_86 | 106334 | 107812 | - | GH77 |
| NULL(UNKNOWN) | HRGMv2_2919_3 | HRGMv2_2919_3_87 | 108585 | 108686 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2919_3 | HRGMv2_2919_3_88 | 108900 | 109754 | + | 3.A.1.24.5 |
| TC | HRGMv2_2919_3 | HRGMv2_2919_3_89 | 109808 | 110818 | + | 3.A.1.24.1 |
| TC | HRGMv2_2919_3 | HRGMv2_2919_3_90 | 110811 | 111512 | + | 3.A.1.24.5 |
Gene ID: HRGMv2_2919_3_85
Type: CAZyme
Location: 103935 - 106268 (-)
Type: CAZyme
Location: 103935 - 106268 (-)
Gene ID: HRGMv2_2919_3_86
Type: CAZyme
Location: 106334 - 107812 (-)
Type: CAZyme
Location: 106334 - 107812 (-)
Gene ID: HRGMv2_2919_3_87
Type:
Location: 108585 - 108686 (+)
Type:
Location: 108585 - 108686 (+)
Gene ID: HRGMv2_2919_3_88
Type: TC
Location: 108900 - 109754 (+)
Type: TC
Location: 108900 - 109754 (+)
Gene ID: HRGMv2_2919_3_89
Type: TC
Location: 109808 - 110818 (+)
Type: TC
Location: 109808 - 110818 (+)
Gene ID: HRGMv2_2919_3_90
Type: TC
Location: 110811 - 111512 (+)
Type: TC
Location: 110811 - 111512 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia gallistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2919_3_90 | vegetarian > vegan | 1.21057 | 0.00863 |