Cluster: HRGMv2_2919_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2919
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2919_34 | HRGMv2_2919_34_1 | 1 | 3780 | - | GH85 |
| pfam | HRGMv2_2919_34 | HRGMv2_2919_34_2 | 4299 | 5234 | - | PMI_typeI_cat | MPI_cupin_dom |
| pfam | HRGMv2_2919_34 | HRGMv2_2919_34_3 | 5231 | 6124 | - | ROK |
| TC | HRGMv2_2919_34 | HRGMv2_2919_34_4 | 6413 | 8143 | + | 8.A.59.2.1 |
| TF | HRGMv2_2919_34 | HRGMv2_2919_34_5 | 8145 | 9029 | + | HTH_AraC |
| STP | HRGMv2_2919_34 | HRGMv2_2919_34_6 | 8990 | 10450 | + | SBP_bac_1 |
| TC | HRGMv2_2919_34 | HRGMv2_2919_34_7 | 10468 | 11115 | + | 9.B.28.1.2 |
Gene ID: HRGMv2_2919_34_1
Type: CAZyme
Location: 1 - 3780 (-)
Type: CAZyme
Location: 1 - 3780 (-)
Gene ID: HRGMv2_2919_34_2
Type: pfam
Location: 4299 - 5234 (-)
Type: pfam
Location: 4299 - 5234 (-)
Gene ID: HRGMv2_2919_34_3
Type: pfam
Location: 5231 - 6124 (-)
Type: pfam
Location: 5231 - 6124 (-)
Gene ID: HRGMv2_2919_34_4
Type: TC
Location: 6413 - 8143 (+)
Type: TC
Location: 6413 - 8143 (+)
Gene ID: HRGMv2_2919_34_5
Type: TF
Location: 8145 - 9029 (+)
Type: TF
Location: 8145 - 9029 (+)
Gene ID: HRGMv2_2919_34_6
Type: STP
Location: 8990 - 10450 (+)
Type: STP
Location: 8990 - 10450 (+)
Gene ID: HRGMv2_2919_34_7
Type: TC
Location: 10468 - 11115 (+)
Type: TC
Location: 10468 - 11115 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia gallistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.