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Cluster: HRGMv2_2919_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2919_24 HRGMv2_2919_24_6 6669 8933 - GH3
CAZyme HRGMv2_2919_24 HRGMv2_2919_24_7 9073 12228 - GH38
CAZyme HRGMv2_2919_24 HRGMv2_2919_24_8 12277 13263 - GH130_2
pfam HRGMv2_2919_24 HRGMv2_2919_24_9 13634 15187 - DUF3502
TC HRGMv2_2919_24 HRGMv2_2919_24_10 15261 16190 - 3.A.1.1.29
TC HRGMv2_2919_24 HRGMv2_2919_24_11 16203 17189 - 3.A.1.1.10
CAZyme HRGMv2_2919_24 HRGMv2_2919_24_12 17549 19309 - GH35
TC HRGMv2_2919_24 HRGMv2_2919_24_13 19499 21421 - 2.A.16.2.2
CAZyme HRGMv2_2919_24 HRGMv2_2919_24_14 21535 22845 + GH13_20
TC HRGMv2_2919_24 HRGMv2_2919_24_15 22916 25549 - 3.A.3.2.21
TC HRGMv2_2919_24 HRGMv2_2919_24_16 25839 27116 - 2.A.45.2.2
Gene ID: HRGMv2_2919_24_6
Type: CAZyme
Location: 6669 - 8933 (-)
Gene ID: HRGMv2_2919_24_7
Type: CAZyme
Location: 9073 - 12228 (-)
Gene ID: HRGMv2_2919_24_8
Type: CAZyme
Location: 12277 - 13263 (-)
Gene ID: HRGMv2_2919_24_9
Type: pfam
Location: 13634 - 15187 (-)
Gene ID: HRGMv2_2919_24_10
Type: TC
Location: 15261 - 16190 (-)
Gene ID: HRGMv2_2919_24_11
Type: TC
Location: 16203 - 17189 (-)
Gene ID: HRGMv2_2919_24_12
Type: CAZyme
Location: 17549 - 19309 (-)
Gene ID: HRGMv2_2919_24_13
Type: TC
Location: 19499 - 21421 (-)
Gene ID: HRGMv2_2919_24_14
Type: CAZyme
Location: 21535 - 22845 (+)
Gene ID: HRGMv2_2919_24_15
Type: TC
Location: 22916 - 25549 (-)
Gene ID: HRGMv2_2919_24_16
Type: TC
Location: 25839 - 27116 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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