Cluster: HRGMv2_2919_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2919
- CGC Family ID: CGCFAM_08040
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2919_17 | HRGMv2_2919_17_29 | 32796 | 33923 | - | 3.A.1.11.7 |
| TC | HRGMv2_2919_17 | HRGMv2_2919_17_30 | 33943 | 34767 | - | 3.A.1.11.7 |
| TC | HRGMv2_2919_17 | HRGMv2_2919_17_31 | 34764 | 35621 | - | 3.A.1.11.2 |
| TC | HRGMv2_2919_17 | HRGMv2_2919_17_32 | 35608 | 36729 | - | 3.A.1.11.8 |
| pfam | HRGMv2_2919_17 | HRGMv2_2919_17_33 | 36818 | 37825 | - | PseudoU_synth_2 | S4 |
| CAZyme | HRGMv2_2919_17 | HRGMv2_2919_17_34 | 38140 | 43077 | + | GH85 |
Gene ID: HRGMv2_2919_17_29
Type: TC
Location: 32796 - 33923 (-)
Type: TC
Location: 32796 - 33923 (-)
Gene ID: HRGMv2_2919_17_30
Type: TC
Location: 33943 - 34767 (-)
Type: TC
Location: 33943 - 34767 (-)
Gene ID: HRGMv2_2919_17_31
Type: TC
Location: 34764 - 35621 (-)
Type: TC
Location: 34764 - 35621 (-)
Gene ID: HRGMv2_2919_17_32
Type: TC
Location: 35608 - 36729 (-)
Type: TC
Location: 35608 - 36729 (-)
Gene ID: HRGMv2_2919_17_33
Type: pfam
Location: 36818 - 37825 (-)
Type: pfam
Location: 36818 - 37825 (-)
Gene ID: HRGMv2_2919_17_34
Type: CAZyme
Location: 38140 - 43077 (+)
Type: CAZyme
Location: 38140 - 43077 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia gallistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.