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Cluster: HRGMv2_2917_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2917_6 HRGMv2_2917_6_3 1414 3147 - 1.A.11.2.3
pfam HRGMv2_2917_6 HRGMv2_2917_6_4 3308 3847 - Rubrerythrin | RUBY_RBDX
TF HRGMv2_2917_6 HRGMv2_2917_6_5 3828 4277 - FUR
CAZyme HRGMv2_2917_6 HRGMv2_2917_6_6 4676 5842 - GH179
pfam HRGMv2_2917_6 HRGMv2_2917_6_7 5869 6681 - AP_endonuc_2
pfam HRGMv2_2917_6 HRGMv2_2917_6_8 6828 7721 + EamA | EamA | TPT
TC HRGMv2_2917_6 HRGMv2_2917_6_9 7718 8650 + 3.A.1.15.11
TC HRGMv2_2917_6 HRGMv2_2917_6_10 8650 9354 + 3.A.1.14.11
TC HRGMv2_2917_6 HRGMv2_2917_6_11 9347 10177 + 3.A.1.15.3
Gene ID: HRGMv2_2917_6_3
Type: TC
Location: 1414 - 3147 (-)
Gene ID: HRGMv2_2917_6_4
Type: pfam
Location: 3308 - 3847 (-)
Gene ID: HRGMv2_2917_6_5
Type: TF
Location: 3828 - 4277 (-)
Gene ID: HRGMv2_2917_6_6
Type: CAZyme
Location: 4676 - 5842 (-)
Gene ID: HRGMv2_2917_6_7
Type: pfam
Location: 5869 - 6681 (-)
Gene ID: HRGMv2_2917_6_8
Type: pfam
Location: 6828 - 7721 (+)
Gene ID: HRGMv2_2917_6_9
Type: TC
Location: 7718 - 8650 (+)
Gene ID: HRGMv2_2917_6_10
Type: TC
Location: 8650 - 9354 (+)
Gene ID: HRGMv2_2917_6_11
Type: TC
Location: 9347 - 10177 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
QAKW01
→
Genus
HGM12957
→
Species
HGM12957 sp900760695

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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