Cluster: HRGMv2_2917_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2917
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2917_5 | HRGMv2_2917_5_22 | 25586 | 27439 | - | 3.A.1.106.9 |
| NULL(UNKNOWN) | HRGMv2_2917_5 | HRGMv2_2917_5_23 | 27658 | 28275 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2917_5 | HRGMv2_2917_5_24 | 28567 | 29718 | - | Exo_endo_phos |
| CAZyme | HRGMv2_2917_5 | HRGMv2_2917_5_25 | 29894 | 35128 | - | CBM67 | GH78 |
| TF | HRGMv2_2917_5 | HRGMv2_2917_5_26 | 35328 | 36185 | + | HTH_AraC |
| CAZyme | HRGMv2_2917_5 | HRGMv2_2917_5_27 | 36182 | 37243 | + | GH179 |
Gene ID: HRGMv2_2917_5_22
Type: TC
Location: 25586 - 27439 (-)
Type: TC
Location: 25586 - 27439 (-)
Gene ID: HRGMv2_2917_5_23
Type:
Location: 27658 - 28275 (+)
Type:
Location: 27658 - 28275 (+)
Gene ID: HRGMv2_2917_5_24
Type: pfam
Location: 28567 - 29718 (-)
Type: pfam
Location: 28567 - 29718 (-)
Gene ID: HRGMv2_2917_5_25
Type: CAZyme
Location: 29894 - 35128 (-)
Type: CAZyme
Location: 29894 - 35128 (-)
Gene ID: HRGMv2_2917_5_26
Type: TF
Location: 35328 - 36185 (+)
Type: TF
Location: 35328 - 36185 (+)
Gene ID: HRGMv2_2917_5_27
Type: CAZyme
Location: 36182 - 37243 (+)
Type: CAZyme
Location: 36182 - 37243 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
QAKW01
Genus
HGM12957
Species
HGM12957 sp900760695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.