Cluster: HRGMv2_2917_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2917
- CGC Family ID: CGCFAM_08166
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2917_2 | HRGMv2_2917_2_54 | 56418 | 58151 | - | 3.A.1.106.2 |
| pfam | HRGMv2_2917_2 | HRGMv2_2917_2_55 | 58154 | 59617 | - | PK | PK_C |
| TC | HRGMv2_2917_2 | HRGMv2_2917_2_56 | 59694 | 60221 | + | 3.A.1.25.5 |
| pfam | HRGMv2_2917_2 | HRGMv2_2917_2_57 | 60594 | 62672 | + | tRNA-synt_2 | tRNA_anti-codon | GatC | GAD |
| TC | HRGMv2_2917_2 | HRGMv2_2917_2_58 | 62686 | 64125 | + | 3.A.9.1.1 |
| pfam | HRGMv2_2917_2 | HRGMv2_2917_2_59 | 64122 | 65549 | + | GatB_Yqey | GatB_N |
| CAZyme | HRGMv2_2917_2 | HRGMv2_2917_2_60 | 65623 | 66585 | + | GT2 |
Gene ID: HRGMv2_2917_2_54
Type: TC
Location: 56418 - 58151 (-)
Type: TC
Location: 56418 - 58151 (-)
Gene ID: HRGMv2_2917_2_55
Type: pfam
Location: 58154 - 59617 (-)
Type: pfam
Location: 58154 - 59617 (-)
Gene ID: HRGMv2_2917_2_56
Type: TC
Location: 59694 - 60221 (+)
Type: TC
Location: 59694 - 60221 (+)
Gene ID: HRGMv2_2917_2_57
Type: pfam
Location: 60594 - 62672 (+)
Type: pfam
Location: 60594 - 62672 (+)
Gene ID: HRGMv2_2917_2_58
Type: TC
Location: 62686 - 64125 (+)
Type: TC
Location: 62686 - 64125 (+)
Gene ID: HRGMv2_2917_2_59
Type: pfam
Location: 64122 - 65549 (+)
Type: pfam
Location: 64122 - 65549 (+)
Gene ID: HRGMv2_2917_2_60
Type: CAZyme
Location: 65623 - 66585 (+)
Type: CAZyme
Location: 65623 - 66585 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
QAKW01
Genus
HGM12957
Species
HGM12957 sp900760695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.