Cluster: HRGMv2_2917_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2917
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2917_30 | HRGMv2_2917_30_8 | 10462 | 11109 | - | 2.A.38.4.6 |
| TC | HRGMv2_2917_30 | HRGMv2_2917_30_9 | 11123 | 12460 | - | 2.A.38.4.1 |
| pfam | HRGMv2_2917_30 | HRGMv2_2917_30_10 | 12782 | 13738 | + | URO-D |
| TF | HRGMv2_2917_30 | HRGMv2_2917_30_11 | 13769 | 14674 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2917_30 | HRGMv2_2917_30_12 | 14803 | 15888 | + | GH179 |
| pfam | HRGMv2_2917_30 | HRGMv2_2917_30_13 | 15885 | 16823 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| TC | HRGMv2_2917_30 | HRGMv2_2917_30_14 | 16977 | 20528 | + | 3.A.1.122.2 |
Gene ID: HRGMv2_2917_30_8
Type: TC
Location: 10462 - 11109 (-)
Type: TC
Location: 10462 - 11109 (-)
Gene ID: HRGMv2_2917_30_9
Type: TC
Location: 11123 - 12460 (-)
Type: TC
Location: 11123 - 12460 (-)
Gene ID: HRGMv2_2917_30_10
Type: pfam
Location: 12782 - 13738 (+)
Type: pfam
Location: 12782 - 13738 (+)
Gene ID: HRGMv2_2917_30_11
Type: TF
Location: 13769 - 14674 (-)
Type: TF
Location: 13769 - 14674 (-)
Gene ID: HRGMv2_2917_30_12
Type: CAZyme
Location: 14803 - 15888 (+)
Type: CAZyme
Location: 14803 - 15888 (+)
Gene ID: HRGMv2_2917_30_13
Type: pfam
Location: 15885 - 16823 (+)
Type: pfam
Location: 15885 - 16823 (+)
Gene ID: HRGMv2_2917_30_14
Type: TC
Location: 16977 - 20528 (+)
Type: TC
Location: 16977 - 20528 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
QAKW01
Genus
HGM12957
Species
HGM12957 sp900760695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.