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Cluster: HRGMv2_2917_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2917_29 HRGMv2_2917_29_1 2 751 + 3.A.1.11.7
TC HRGMv2_2917_29 HRGMv2_2917_29_2 748 1566 + 3.A.1.11.1
TC HRGMv2_2917_29 HRGMv2_2917_29_3 1563 2351 + 3.A.1.11.7
TC HRGMv2_2917_29 HRGMv2_2917_29_4 2351 3391 + 3.A.1.11.7
peptidase HRGMv2_2917_29 HRGMv2_2917_29_5 3432 4955 - S16.UNW
STP HRGMv2_2917_29 HRGMv2_2917_29_6 5144 8692 + Fer4
TC HRGMv2_2917_29 HRGMv2_2917_29_7 8809 9258 + 9.A.11.1.1
TC HRGMv2_2917_29 HRGMv2_2917_29_8 9263 10279 + 9.A.11.1.1
pfam HRGMv2_2917_29 HRGMv2_2917_29_9 10285 10638 + SpoVAC_SpoVAEB
CAZyme HRGMv2_2917_29 HRGMv2_2917_29_10 10700 12742 + GH78
Gene ID: HRGMv2_2917_29_1
Type: TC
Location: 2 - 751 (+)
Gene ID: HRGMv2_2917_29_2
Type: TC
Location: 748 - 1566 (+)
Gene ID: HRGMv2_2917_29_3
Type: TC
Location: 1563 - 2351 (+)
Gene ID: HRGMv2_2917_29_4
Type: TC
Location: 2351 - 3391 (+)
Gene ID: HRGMv2_2917_29_5
Type: peptidase
Location: 3432 - 4955 (-)
Gene ID: HRGMv2_2917_29_6
Type: STP
Location: 5144 - 8692 (+)
Gene ID: HRGMv2_2917_29_7
Type: TC
Location: 8809 - 9258 (+)
Gene ID: HRGMv2_2917_29_8
Type: TC
Location: 9263 - 10279 (+)
Gene ID: HRGMv2_2917_29_9
Type: pfam
Location: 10285 - 10638 (+)
Gene ID: HRGMv2_2917_29_10
Type: CAZyme
Location: 10700 - 12742 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
QAKW01
→
Genus
HGM12957
→
Species
HGM12957 sp900760695

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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