Cluster: HRGMv2_2917_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2917
- CGC Family ID: CGCFAM_00554
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2917_15 | HRGMv2_2917_15_8 | 8063 | 9316 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_2917_15 | HRGMv2_2917_15_9 | 9329 | 9442 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_2917_15 | HRGMv2_2917_15_10 | 9531 | 10403 | + | HTH_1 |
| TC | HRGMv2_2917_15 | HRGMv2_2917_15_11 | 10397 | 12124 | + | 3.A.1.135.5 |
| TC | HRGMv2_2917_15 | HRGMv2_2917_15_12 | 12114 | 13853 | + | 3.A.1.135.5 |
Gene ID: HRGMv2_2917_15_8
Type: CAZyme
Location: 8063 - 9316 (+)
Type: CAZyme
Location: 8063 - 9316 (+)
Gene ID: HRGMv2_2917_15_9
Type:
Location: 9329 - 9442 (+)
Type:
Location: 9329 - 9442 (+)
Gene ID: HRGMv2_2917_15_10
Type: TF
Location: 9531 - 10403 (+)
Type: TF
Location: 9531 - 10403 (+)
Gene ID: HRGMv2_2917_15_11
Type: TC
Location: 10397 - 12124 (+)
Type: TC
Location: 10397 - 12124 (+)
Gene ID: HRGMv2_2917_15_12
Type: TC
Location: 12114 - 13853 (+)
Type: TC
Location: 12114 - 13853 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
QAKW01
Genus
HGM12957
Species
HGM12957 sp900760695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.