Cluster: HRGMv2_2917_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2917
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2917_14 | HRGMv2_2917_14_17 | 10972 | 11712 | - | GT26 |
| pfam | HRGMv2_2917_14 | HRGMv2_2917_14_18 | 11883 | 12500 | - | VTT_dom |
| TC | HRGMv2_2917_14 | HRGMv2_2917_14_19 | 12525 | 13382 | - | 2.A.7.2.1 |
| TC | HRGMv2_2917_14 | HRGMv2_2917_14_20 | 13495 | 14676 | - | 3.B.1.1.2 |
| TC | HRGMv2_2917_14 | HRGMv2_2917_14_21 | 14692 | 15057 | - | 3.B.1.1.2 |
| pfam | HRGMv2_2917_14 | HRGMv2_2917_14_22 | 15059 | 15364 | - | OAD_gamma |
| TC | HRGMv2_2917_14 | HRGMv2_2917_14_23 | 15377 | 16759 | - | 3.B.1.1.6 |
Gene ID: HRGMv2_2917_14_17
Type: CAZyme
Location: 10972 - 11712 (-)
Type: CAZyme
Location: 10972 - 11712 (-)
Gene ID: HRGMv2_2917_14_18
Type: pfam
Location: 11883 - 12500 (-)
Type: pfam
Location: 11883 - 12500 (-)
Gene ID: HRGMv2_2917_14_19
Type: TC
Location: 12525 - 13382 (-)
Type: TC
Location: 12525 - 13382 (-)
Gene ID: HRGMv2_2917_14_20
Type: TC
Location: 13495 - 14676 (-)
Type: TC
Location: 13495 - 14676 (-)
Gene ID: HRGMv2_2917_14_21
Type: TC
Location: 14692 - 15057 (-)
Type: TC
Location: 14692 - 15057 (-)
Gene ID: HRGMv2_2917_14_22
Type: pfam
Location: 15059 - 15364 (-)
Type: pfam
Location: 15059 - 15364 (-)
Gene ID: HRGMv2_2917_14_23
Type: TC
Location: 15377 - 16759 (-)
Type: TC
Location: 15377 - 16759 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
QAKW01
Genus
HGM12957
Species
HGM12957 sp900760695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.