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Cluster: HRGMv2_2917_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2917_10 HRGMv2_2917_10_24 19625 21223 - 3.A.1.147.6
TC HRGMv2_2917_10 HRGMv2_2917_10_25 21216 21929 - 3.A.1.147.6
CAZyme HRGMv2_2917_10 HRGMv2_2917_10_26 21944 23227 - CE4
TC HRGMv2_2917_10 HRGMv2_2917_10_27 23489 24844 + 1.A.26.1.2
TF HRGMv2_2917_10 HRGMv2_2917_10_28 24859 25683 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_2917_10 HRGMv2_2917_10_29 25796 26830 + GH109
pfam HRGMv2_2917_10 HRGMv2_2917_10_30 26848 27378 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 | Rv0428c_C
pfam HRGMv2_2917_10 HRGMv2_2917_10_31 27390 27830 - MscL
TC HRGMv2_2917_10 HRGMv2_2917_10_32 27832 29592 - 2.A.58.2.2
Gene ID: HRGMv2_2917_10_24
Type: TC
Location: 19625 - 21223 (-)
Gene ID: HRGMv2_2917_10_25
Type: TC
Location: 21216 - 21929 (-)
Gene ID: HRGMv2_2917_10_26
Type: CAZyme
Location: 21944 - 23227 (-)
Gene ID: HRGMv2_2917_10_27
Type: TC
Location: 23489 - 24844 (+)
Gene ID: HRGMv2_2917_10_28
Type: TF
Location: 24859 - 25683 (-)
Gene ID: HRGMv2_2917_10_29
Type: CAZyme
Location: 25796 - 26830 (+)
Gene ID: HRGMv2_2917_10_30
Type: pfam
Location: 26848 - 27378 (-)
Gene ID: HRGMv2_2917_10_31
Type: pfam
Location: 27390 - 27830 (-)
Gene ID: HRGMv2_2917_10_32
Type: TC
Location: 27832 - 29592 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
QAKW01
→
Genus
HGM12957
→
Species
HGM12957 sp900760695

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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