Cluster: HRGMv2_2915_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2915
- CGC Family ID: CGCFAM_10227
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2915_36 | HRGMv2_2915_36_10 | 10446 | 11216 | + | 3.A.1.17.5 |
| TC | HRGMv2_2915_36 | HRGMv2_2915_36_11 | 11209 | 11781 | + | 3.A.1.17.2 |
| pfam | HRGMv2_2915_36 | HRGMv2_2915_36_12 | 12148 | 14430 | - | FtsX | FtsX |
| TC | HRGMv2_2915_36 | HRGMv2_2915_36_13 | 14441 | 15142 | - | 3.A.1.122.14 |
| NULL(UNKNOWN) | HRGMv2_2915_36 | HRGMv2_2915_36_14 | 15205 | 15420 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2915_36 | HRGMv2_2915_36_15 | 15765 | 16577 | + | CE4 |
| CAZyme | HRGMv2_2915_36 | HRGMv2_2915_36_16 | 16574 | 17254 | + | CE4 |
Gene ID: HRGMv2_2915_36_10
Type: TC
Location: 10446 - 11216 (+)
Type: TC
Location: 10446 - 11216 (+)
Gene ID: HRGMv2_2915_36_11
Type: TC
Location: 11209 - 11781 (+)
Type: TC
Location: 11209 - 11781 (+)
Gene ID: HRGMv2_2915_36_12
Type: pfam
Location: 12148 - 14430 (-)
Type: pfam
Location: 12148 - 14430 (-)
Gene ID: HRGMv2_2915_36_13
Type: TC
Location: 14441 - 15142 (-)
Type: TC
Location: 14441 - 15142 (-)
Gene ID: HRGMv2_2915_36_14
Type:
Location: 15205 - 15420 (-)
Type:
Location: 15205 - 15420 (-)
Gene ID: HRGMv2_2915_36_15
Type: CAZyme
Location: 15765 - 16577 (+)
Type: CAZyme
Location: 15765 - 16577 (+)
Gene ID: HRGMv2_2915_36_16
Type: CAZyme
Location: 16574 - 17254 (+)
Type: CAZyme
Location: 16574 - 17254 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1865
Species
UMGS1865 sp900547725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2915_36_10 | vegan > omnivore | 1.80112 | 0.00937 |
| HRGMv2_2915_36_11 | vegan > omnivore | 2.03491 | 0.00937 |
| HRGMv2_2915_36_13 | vegan > omnivore | 1.46378 | 0.00937 |
| HRGMv2_2915_36_15 | vegan > omnivore | 1.91655 | 0.00937 |
| HRGMv2_2915_36_16 | vegan > omnivore | 2.15590 | 0.00937 |