Cluster: HRGMv2_2915_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2915
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2915_11 | HRGMv2_2915_11_6 | 4778 | 5569 | - | 3.A.1.14.8 |
| TC | HRGMv2_2915_11 | HRGMv2_2915_11_7 | 5574 | 6626 | - | 3.A.1.14.10 |
| pfam | HRGMv2_2915_11 | HRGMv2_2915_11_8 | 6623 | 7543 | - | Flavodoxin_3 |
| TC | HRGMv2_2915_11 | HRGMv2_2915_11_9 | 8027 | 8659 | + | 9.B.18.1.1 |
| CAZyme | HRGMv2_2915_11 | HRGMv2_2915_11_10 | 8656 | 9762 | + | GT4 |
Gene ID: HRGMv2_2915_11_6
Type: TC
Location: 4778 - 5569 (-)
Type: TC
Location: 4778 - 5569 (-)
Gene ID: HRGMv2_2915_11_7
Type: TC
Location: 5574 - 6626 (-)
Type: TC
Location: 5574 - 6626 (-)
Gene ID: HRGMv2_2915_11_8
Type: pfam
Location: 6623 - 7543 (-)
Type: pfam
Location: 6623 - 7543 (-)
Gene ID: HRGMv2_2915_11_9
Type: TC
Location: 8027 - 8659 (+)
Type: TC
Location: 8027 - 8659 (+)
Gene ID: HRGMv2_2915_11_10
Type: CAZyme
Location: 8656 - 9762 (+)
Type: CAZyme
Location: 8656 - 9762 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1865
Species
UMGS1865 sp900547725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2915_11_8 | vegan > omnivore | 1.09586 | 0.00937 |