Cluster: HRGMv2_2915_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2915
- CGC Family ID: CGCFAM_10226
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2915_9 | HRGMv2_2915_9_22 | 27457 | 28389 | + | 3.A.1.105.3 |
| pfam | HRGMv2_2915_9 | HRGMv2_2915_9_23 | 28386 | 29282 | + | ABC2_membrane | ABC2_membrane_3 |
| NULL(UNKNOWN) | HRGMv2_2915_9 | HRGMv2_2915_9_24 | 29410 | 30129 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2915_9 | HRGMv2_2915_9_25 | 30176 | 31534 | - | 2.A.66.1.32 |
| pfam | HRGMv2_2915_9 | HRGMv2_2915_9_26 | 31640 | 32350 | + | VanZ |
| NULL(UNKNOWN) | HRGMv2_2915_9 | HRGMv2_2915_9_27 | 33056 | 33472 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2915_9 | HRGMv2_2915_9_28 | 33573 | 35975 | + | GT51 |
Gene ID: HRGMv2_2915_9_22
Type: TC
Location: 27457 - 28389 (+)
Type: TC
Location: 27457 - 28389 (+)
Gene ID: HRGMv2_2915_9_23
Type: pfam
Location: 28386 - 29282 (+)
Type: pfam
Location: 28386 - 29282 (+)
Gene ID: HRGMv2_2915_9_24
Type:
Location: 29410 - 30129 (+)
Type:
Location: 29410 - 30129 (+)
Gene ID: HRGMv2_2915_9_25
Type: TC
Location: 30176 - 31534 (-)
Type: TC
Location: 30176 - 31534 (-)
Gene ID: HRGMv2_2915_9_26
Type: pfam
Location: 31640 - 32350 (+)
Type: pfam
Location: 31640 - 32350 (+)
Gene ID: HRGMv2_2915_9_27
Type:
Location: 33056 - 33472 (-)
Type:
Location: 33056 - 33472 (-)
Gene ID: HRGMv2_2915_9_28
Type: CAZyme
Location: 33573 - 35975 (+)
Type: CAZyme
Location: 33573 - 35975 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1865
Species
UMGS1865 sp900547725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2915_9_24 | vegan > omnivore | 1.36344 | 0.00937 |
| HRGMv2_2915_9_25 | vegan > omnivore | 1.42441 | 0.00937 |
| HRGMv2_2915_9_27 | vegan > omnivore | 2.00799 | 0.00937 |
| HRGMv2_2915_9_28 | vegan > omnivore | 1.62680 | 0.00937 |