Cluster: HRGMv2_2915_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2915
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2915_75 | HRGMv2_2915_75_6 | 6609 | 7232 | - | 2.A.115.2.14 |
| pfam | HRGMv2_2915_75 | HRGMv2_2915_75_7 | 7382 | 7663 | + | DUF1294 |
| CAZyme | HRGMv2_2915_75 | HRGMv2_2915_75_8 | 7716 | 9374 | + | GH110 |
Gene ID: HRGMv2_2915_75_6
Type: TC
Location: 6609 - 7232 (-)
Type: TC
Location: 6609 - 7232 (-)
Gene ID: HRGMv2_2915_75_7
Type: pfam
Location: 7382 - 7663 (+)
Type: pfam
Location: 7382 - 7663 (+)
Gene ID: HRGMv2_2915_75_8
Type: CAZyme
Location: 7716 - 9374 (+)
Type: CAZyme
Location: 7716 - 9374 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1865
Species
UMGS1865 sp900547725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2915_75_6 | vegan > omnivore | 2.11355 | 0.00937 |
| HRGMv2_2915_75_7 | vegan > omnivore | 1.70686 | 0.00937 |
| HRGMv2_2915_75_8 | vegan > omnivore | 2.41279 | 0.00937 |