Cluster: HRGMv2_2915_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2915
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2915_9 | HRGMv2_2915_9_13 | 16756 | 17751 | + | 9.B.146.1.6 |
| TC | HRGMv2_2915_9 | HRGMv2_2915_9_14 | 17781 | 18983 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2915_9 | HRGMv2_2915_9_15 | 18995 | 20131 | + | GT28 |
Gene ID: HRGMv2_2915_9_13
Type: TC
Location: 16756 - 17751 (+)
Type: TC
Location: 16756 - 17751 (+)
Gene ID: HRGMv2_2915_9_14
Type: TC
Location: 17781 - 18983 (+)
Type: TC
Location: 17781 - 18983 (+)
Gene ID: HRGMv2_2915_9_15
Type: CAZyme
Location: 18995 - 20131 (+)
Type: CAZyme
Location: 18995 - 20131 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1865
Species
UMGS1865 sp900547725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2915_9_13 | vegan > omnivore | 1.81113 | 0.00937 |
| HRGMv2_2915_9_14 | vegan > omnivore | 2.45803 | 0.00937 |
| HRGMv2_2915_9_15 | vegan > omnivore | 1.10139 | 0.00937 |