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Cluster: HRGMv2_2913_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2913_14 HRGMv2_2913_14_26 34265 34795 - GT4
pfam HRGMv2_2913_14 HRGMv2_2913_14_27 34932 35525 - Zn_dep_PLPC
NULL(UNKNOWN) HRGMv2_2913_14 HRGMv2_2913_14_28 35539 36003 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2913_14 HRGMv2_2913_14_29 36108 36965 - 2.A.7.2.1
TF HRGMv2_2913_14 HRGMv2_2913_14_30 36968 37666 - Trans_reg_C
STP HRGMv2_2913_14 HRGMv2_2913_14_31 37659 38813 - HATPase_c | HisKA
TC HRGMv2_2913_14 HRGMv2_2913_14_32 39113 40456 - 2.A.8.1.7
Gene ID: HRGMv2_2913_14_26
Type: CAZyme
Location: 34265 - 34795 (-)
Gene ID: HRGMv2_2913_14_27
Type: pfam
Location: 34932 - 35525 (-)
Gene ID: HRGMv2_2913_14_28
Type:
Location: 35539 - 36003 (-)
Gene ID: HRGMv2_2913_14_29
Type: TC
Location: 36108 - 36965 (-)
Gene ID: HRGMv2_2913_14_30
Type: TF
Location: 36968 - 37666 (-)
Gene ID: HRGMv2_2913_14_31
Type: STP
Location: 37659 - 38813 (-)
Gene ID: HRGMv2_2913_14_32
Type: TC
Location: 39113 - 40456 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2913_14_30 vegetarian > vegan 2.33413 0.01882

🧭 Explore Read Mapping of CGC

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