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Cluster: HRGMv2_2910_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2910_5 HRGMv2_2910_5_107 123299 125320 - GH42
TC HRGMv2_2910_5 HRGMv2_2910_5_108 125784 126761 - 3.A.1.5.20
TC HRGMv2_2910_5 HRGMv2_2910_5_109 126751 127779 - 3.A.1.5.19
TC HRGMv2_2910_5 HRGMv2_2910_5_110 127785 128738 - 3.A.1.5.2
TC HRGMv2_2910_5 HRGMv2_2910_5_111 128743 129681 - 3.A.1.5.2
TC HRGMv2_2910_5 HRGMv2_2910_5_112 129910 131640 - 3.A.1.5.2
Gene ID: HRGMv2_2910_5_107
Type: CAZyme
Location: 123299 - 125320 (-)
Gene ID: HRGMv2_2910_5_108
Type: TC
Location: 125784 - 126761 (-)
Gene ID: HRGMv2_2910_5_109
Type: TC
Location: 126751 - 127779 (-)
Gene ID: HRGMv2_2910_5_110
Type: TC
Location: 127785 - 128738 (-)
Gene ID: HRGMv2_2910_5_111
Type: TC
Location: 128743 - 129681 (-)
Gene ID: HRGMv2_2910_5_112
Type: TC
Location: 129910 - 131640 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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