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Cluster: HRGMv2_2910_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2910_17 HRGMv2_2910_17_28 32512 34329 + 3.A.1.106.13
pfam HRGMv2_2910_17 HRGMv2_2910_17_29 34310 35149 + Big_3 | Bact_surface_Ig-like
TC HRGMv2_2910_17 HRGMv2_2910_17_30 35146 36516 + 8.A.3.1.2
TC HRGMv2_2910_17 HRGMv2_2910_17_31 36546 38048 + 8.A.3.1.2
pfam HRGMv2_2910_17 HRGMv2_2910_17_32 38045 38779 + CpsB_CapC
TC HRGMv2_2910_17 HRGMv2_2910_17_33 38827 40908 + 9.B.18.2.1
pfam HRGMv2_2910_17 HRGMv2_2910_17_34 40943 42238 + DegT_DnrJ_EryC1
TC HRGMv2_2910_17 HRGMv2_2910_17_35 42264 42902 + 9.B.18.1.2
pfam HRGMv2_2910_17 HRGMv2_2910_17_36 42902 43516 + Hexapep | PglD_N
CAZyme HRGMv2_2910_17 HRGMv2_2910_17_37 43522 44790 + GT4
CAZyme HRGMv2_2910_17 HRGMv2_2910_17_38 44787 46613 + PL12
pfam HRGMv2_2910_17 HRGMv2_2910_17_39 46629 47849 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam HRGMv2_2910_17 HRGMv2_2910_17_40 47864 48970 + Epimerase_2
TC HRGMv2_2910_17 HRGMv2_2910_17_41 48957 49997 + 9.B.18.2.1
Gene ID: HRGMv2_2910_17_28
Type: TC
Location: 32512 - 34329 (+)
Gene ID: HRGMv2_2910_17_29
Type: pfam
Location: 34310 - 35149 (+)
Gene ID: HRGMv2_2910_17_30
Type: TC
Location: 35146 - 36516 (+)
Gene ID: HRGMv2_2910_17_31
Type: TC
Location: 36546 - 38048 (+)
Gene ID: HRGMv2_2910_17_32
Type: pfam
Location: 38045 - 38779 (+)
Gene ID: HRGMv2_2910_17_33
Type: TC
Location: 38827 - 40908 (+)
Gene ID: HRGMv2_2910_17_34
Type: pfam
Location: 40943 - 42238 (+)
Gene ID: HRGMv2_2910_17_35
Type: TC
Location: 42264 - 42902 (+)
Gene ID: HRGMv2_2910_17_36
Type: pfam
Location: 42902 - 43516 (+)
Gene ID: HRGMv2_2910_17_37
Type: CAZyme
Location: 43522 - 44790 (+)
Gene ID: HRGMv2_2910_17_38
Type: CAZyme
Location: 44787 - 46613 (+)
Gene ID: HRGMv2_2910_17_39
Type: pfam
Location: 46629 - 47849 (+)
Gene ID: HRGMv2_2910_17_40
Type: pfam
Location: 47864 - 48970 (+)
Gene ID: HRGMv2_2910_17_41
Type: TC
Location: 48957 - 49997 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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