dbCAN Logo

Cluster: HRGMv2_2910_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2910_1 HRGMv2_2910_1_17 18512 20944 - GH2
CAZyme HRGMv2_2910_1 HRGMv2_2910_1_18 20959 22797 - GH36
TC HRGMv2_2910_1 HRGMv2_2910_1_19 23409 24356 + 3.A.1.1.10
TC HRGMv2_2910_1 HRGMv2_2910_1_20 24369 25271 + 3.A.1.1.10
STP HRGMv2_2910_1 HRGMv2_2910_1_21 25364 27229 + SBP_bac_1
CAZyme HRGMv2_2910_1 HRGMv2_2910_1_22 27345 29693 + GH95
NULL(UNKNOWN) HRGMv2_2910_1 HRGMv2_2910_1_23 29701 30519 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2910_1 HRGMv2_2910_1_24 30540 30971 + RbsD_FucU
CAZyme HRGMv2_2910_1 HRGMv2_2910_1_25 31047 32471 - GH43_35
Gene ID: HRGMv2_2910_1_17
Type: CAZyme
Location: 18512 - 20944 (-)
Gene ID: HRGMv2_2910_1_18
Type: CAZyme
Location: 20959 - 22797 (-)
Gene ID: HRGMv2_2910_1_19
Type: TC
Location: 23409 - 24356 (+)
Gene ID: HRGMv2_2910_1_20
Type: TC
Location: 24369 - 25271 (+)
Gene ID: HRGMv2_2910_1_21
Type: STP
Location: 25364 - 27229 (+)
Gene ID: HRGMv2_2910_1_22
Type: CAZyme
Location: 27345 - 29693 (+)
Gene ID: HRGMv2_2910_1_23
Type:
Location: 29701 - 30519 (+)
Gene ID: HRGMv2_2910_1_24
Type: pfam
Location: 30540 - 30971 (+)
Gene ID: HRGMv2_2910_1_25
Type: CAZyme
Location: 31047 - 32471 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List