Cluster: HRGMv2_2908_CGC8
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_2908
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2908_2 | HRGMv2_2908_2_187 | 183100 | 184836 | - | CE4 |
| TF | HRGMv2_2908_2 | HRGMv2_2908_2_188 | 185046 | 185864 | - | MerR |
| NULL(UNKNOWN) | HRGMv2_2908_2 | HRGMv2_2908_2_189 | 185939 | 186070 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2908_2 | HRGMv2_2908_2_190 | 186067 | 187791 | + | 3.A.1.135.7 |
| TC | HRGMv2_2908_2 | HRGMv2_2908_2_191 | 187793 | 189532 | + | 3.A.1.135.7 |
| TC | HRGMv2_2908_2 | HRGMv2_2908_2_192 | 189717 | 190403 | + | 3.A.1.125.3 |
| pfam | HRGMv2_2908_2 | HRGMv2_2908_2_193 | 190393 | 192954 | + | FtsX | FtsX |
| TF | HRGMv2_2908_2 | HRGMv2_2908_2_194 | 193021 | 193701 | + | Trans_reg_C |
| TC | HRGMv2_2908_2 | HRGMv2_2908_2_195 | 193698 | 194720 | + | 2.A.21.9.2 |
| CAZyme | HRGMv2_2908_2 | HRGMv2_2908_2_196 | 194943 | 197288 | + | GH39 |
| CAZyme | HRGMv2_2908_2 | HRGMv2_2908_2_197 | 197539 | 198651 | + | GH179 |
| pfam | HRGMv2_2908_2 | HRGMv2_2908_2_198 | 198671 | 199543 | + | AP_endonuc_2 |
| pfam | HRGMv2_2908_2 | HRGMv2_2908_2_199 | 199557 | 199997 | + | CGDB |
| TC | HRGMv2_2908_2 | HRGMv2_2908_2_200 | 200017 | 201015 | + | 3.A.1.1.10 |
| TC | HRGMv2_2908_2 | HRGMv2_2908_2_201 | 201031 | 201927 | + | 3.A.1.1.10 |
| STP | HRGMv2_2908_2 | HRGMv2_2908_2_202 | 201975 | 203666 | + | SBP_bac_1 |
| CAZyme | HRGMv2_2908_2 | HRGMv2_2908_2_203 | 203782 | 205020 | + | CE1 |
| CAZyme | HRGMv2_2908_2 | HRGMv2_2908_2_204 | 205063 | 206769 | + | GH5_46 |
Gene ID: HRGMv2_2908_2_187
Type: CAZyme
Location: 183100 - 184836 (-)
Type: CAZyme
Location: 183100 - 184836 (-)
Gene ID: HRGMv2_2908_2_188
Type: TF
Location: 185046 - 185864 (-)
Type: TF
Location: 185046 - 185864 (-)
Gene ID: HRGMv2_2908_2_189
Type:
Location: 185939 - 186070 (+)
Type:
Location: 185939 - 186070 (+)
Gene ID: HRGMv2_2908_2_190
Type: TC
Location: 186067 - 187791 (+)
Type: TC
Location: 186067 - 187791 (+)
Gene ID: HRGMv2_2908_2_191
Type: TC
Location: 187793 - 189532 (+)
Type: TC
Location: 187793 - 189532 (+)
Gene ID: HRGMv2_2908_2_192
Type: TC
Location: 189717 - 190403 (+)
Type: TC
Location: 189717 - 190403 (+)
Gene ID: HRGMv2_2908_2_193
Type: pfam
Location: 190393 - 192954 (+)
Type: pfam
Location: 190393 - 192954 (+)
Gene ID: HRGMv2_2908_2_194
Type: TF
Location: 193021 - 193701 (+)
Type: TF
Location: 193021 - 193701 (+)
Gene ID: HRGMv2_2908_2_195
Type: TC
Location: 193698 - 194720 (+)
Type: TC
Location: 193698 - 194720 (+)
Gene ID: HRGMv2_2908_2_196
Type: CAZyme
Location: 194943 - 197288 (+)
Type: CAZyme
Location: 194943 - 197288 (+)
Gene ID: HRGMv2_2908_2_197
Type: CAZyme
Location: 197539 - 198651 (+)
Type: CAZyme
Location: 197539 - 198651 (+)
Gene ID: HRGMv2_2908_2_198
Type: pfam
Location: 198671 - 199543 (+)
Type: pfam
Location: 198671 - 199543 (+)
Gene ID: HRGMv2_2908_2_199
Type: pfam
Location: 199557 - 199997 (+)
Type: pfam
Location: 199557 - 199997 (+)
Gene ID: HRGMv2_2908_2_200
Type: TC
Location: 200017 - 201015 (+)
Type: TC
Location: 200017 - 201015 (+)
Gene ID: HRGMv2_2908_2_201
Type: TC
Location: 201031 - 201927 (+)
Type: TC
Location: 201031 - 201927 (+)
Gene ID: HRGMv2_2908_2_202
Type: STP
Location: 201975 - 203666 (+)
Type: STP
Location: 201975 - 203666 (+)
Gene ID: HRGMv2_2908_2_203
Type: CAZyme
Location: 203782 - 205020 (+)
Type: CAZyme
Location: 203782 - 205020 (+)
Gene ID: HRGMv2_2908_2_204
Type: CAZyme
Location: 205063 - 206769 (+)
Type: CAZyme
Location: 205063 - 206769 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Acutalibacter
Species
Acutalibacter sp900548545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.